Circular RNA expression alterations in extracellular vesicles isolated from murine heart post ischemia/reperfusion injury

Int J Cardiol. 2019 Dec 1:296:136-140. doi: 10.1016/j.ijcard.2019.08.024. Epub 2019 Aug 14.

Abstract

Background: Increasing studies indicated the involvement of extracellular vesicles (EVs) in cardiovascular diseases. However, the role of circular RNAs (circRNAs) in cardiac EVs (cEVs) during ischemia/reperfusion (I/R) injury remain unclear.

Methods: We isolated the cEVs from I/R injured hearts and performed RNA sequencing (RNA-seq) to identify the profile of circRNA in cEVs and investigated their potential roles in I/R pathological process.

Results: Cardiac I/R induced a significantly elevated release of EVs in heart within 24 h. RNA-seq of cEVs identified 185 significantly differentially expressed (DE) circRNAs including 119 down-regulated and 66 up-regulated circRNAs in I/R group compared with the sham. GO and pathway analysis showed that these DE-circRNAs were associated with protein binding and kinase activator activity and mainly involved in the metabolic process. The circRNA-miRNA analysis exhibited the broad potentials of the DE-circRNAs to regulate target genes by acting on the miRNAs.

Conclusions: These findings revealed for the first time the specific expression pattern of circRNAs in EVs derived from sham and I/R heart tissues and provided some potential targets and pathways involving in I/R injury which may provide important evidences for the role of both circRNA and EVs in the pathology of cardiac I/R.

Keywords: Circular RNA; Extracellular vesicles; Ischemia/reperfusion injury; MicroRNA.

MeSH terms

  • Animals
  • Extracellular Vesicles / genetics*
  • Male
  • Mice
  • Mice, Inbred C57BL
  • Myocardium / ultrastructure*
  • RNA, Circular / biosynthesis*
  • Reperfusion Injury / genetics*
  • Sequence Analysis, RNA

Substances

  • RNA, Circular